HORDB

General Information

ID: hor004283
Uniprot ID: NA
Protein name: Tachykinin-related peptide
Gene name: NA
Organism: Cancer borealis
Family: Tachykinin family
Source: animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: NA
GO MF: NA
GO BP: NA
GO CC: NA

Sequence Information

Sequence: APSGFQ
Length: 6
Propeptide: NA
Signal peptide: NA
Modification: T6 Glutamine amide
Glycosylation: NA
Mutagenesis: NA

Activity

Function: NA
Mechanism: NA
Cross BBB: NA
Target: NA
Target Unid: NA
IC50: NA
EC50: NA
ED50: NA
kd: NA
Half life: NA

Structure

Disulfide bond: NA
Structure ID: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor004283_AF2.pdb

hor004283_ESM.pdb

Physical Information

Mass:	69501	Formula:	C27H39N7O9
Absent amino acids:	CDEHIKLMNRTVWY	Common amino acids:	AFGPQS
pI:	6.11	Basic residues:	0
Polar residues:	2	Hydrophobic residues:	2
Hydrophobicity:	-28.33	Boman Index:	-321
Half-Life:	4.4 hour	Half-Life Yeast:	>20 hour
Half-Life E.Coli:	>10 hour	Aliphatic Index	16.67
Instability Index:	7253.33	Extinction Coefficient cystines:	0
Absorbance 280nm:	0

Literature

PubMed ID: 18700782
Title: Combining Microdialysis, NanoLC-MS, and MALDI-TOF/TOF to Detect Neuropeptides Secreted in the Crab, Cancer Borealis